Statistical Analysis of RNA-Seq Tools
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Oct 9, 2025 - R
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differential-analysis
Here are 23 public repositories matching this topic...
scisorseqr is an R-package for processing of single-cell long read data and analyzing differential isoform expression across any two conditions
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Mar 9, 2023 - R
SHAMAN is a SHiny application for Metagenomic ANalysis including a bioinformatic workflow, the statistical analysis and multiple visualization.
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Feb 5, 2025 - R
An easy-to-use and open-source tool for differential, linear, differential-linear, and integral analysis of S-boxes
mpt ddt lat differential-analysis s-box division-property linear-analysis monomial-prediciton integral-analysis dlct ddlct udlct ldlct differential-linear-attacks
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Oct 27, 2025 - C
PenDA is a rank-based method for personalized differential analysis.
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Mar 27, 2024 - R
A differential and enrichment analyses pipeline for bulk ATAC-seq (and RNA-seq)
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May 22, 2024 - R
The statistical utility for RBP functions (SURF)
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Jun 14, 2021 - R
MAnorm2 for Normalizing and Comparing ChIP-seq Samples
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Nov 3, 2022 - HTML
Galaxy wrappers for SARTools (Statistical Analysis of RNA-Seq Tools)
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Jan 6, 2021 - R
A New Method to Search for Boomerang Distinguishers: Improved Rectangle Attacks on SKINNY and CRAFT
milp ddt sat differential-analysis bct dbct boomerang-switch differential-effect skinny-block-cipher craft-block-cipher boomerang-analysis automated-cryptanalysis computer-aided-cryptanalysis
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Aug 26, 2025 - Jupyter Notebook
CV-Inspector: Given a set of sites, it automates the crawling, data collection, differential analysis, and labeling of the sites for circumvention of adblockers
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Oct 8, 2021 - Python
A respository of Differential Cryptanalysis. Mainly focusing on SPN structure, lower bound of active Sbox, differential characteristic.
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Nov 29, 2022 - Python
Comparison of gene usage in immune repertoires under different biological conditions
immunology high-throughput-sequencing immunoglobulin differential-gene-expression immunoinformatics differential-analysis vdj-recombination tcr-repertoire immune-repertoires immunological-bioinformatics immunogenomics immune-repertoire bcr-repertoire immune-repertoire-analysis b-cell-receptor
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Dec 3, 2025 - R
CV-Inspector: Given a set of sites, it automate the crawling, data collection, differential analysis, and labeling of the sites for circumvention of adblockers
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Feb 21, 2021 - Python
In this module, you will learn how to perform the bioinformatics analysis of differential chromatin occupancy using data generated by three well-known high-throughput sequencing assaying, including differences between them and integration of chromatin accessibility and differential gene expression
bioinformatics transcription-factors gcp next-generation-sequencing epigenetics chip-seq atac-seq histone-modifications high-throughput-sequencing differential-gene-expression differential-analysis protein-dna-interactions chromatin-accessibiity aws-sagemaker rna-polymerase peak-identification chromatin-occupancy nih-nigms
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Jun 4, 2025 - HTML
Large-scale Benchmarking of Single-cell Differential Expression Analysis Methods
benchmarking scrna-seq differential-expression scrna-seq-data differential-analysis singlecell scrna-seq-analysis
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Nov 11, 2021 - R
viterbi-algorithm computational-biology gene-expression smith-waterman alternative-splicing gradient-descent differential-expression gillespie genome-analysis gradient-descent-algorithm bowtie2 differential-analysis single-cell-genomics gillespie-algorithm single-cell-analysis gradient-descent-implementation genome-alignment viterbi-decoder smith-waterman-alignment differential-expression-analysis
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Dec 21, 2019 - Jupyter Notebook
A Shiny application for performing differential accessibility analysis of consensus peaks' count data on HiPerGator storage and/or preparing peak data and bam files for such an analysis.
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Oct 28, 2025 - R
Collection of walkthrough tutorials on how to use Tweedieverse for differential analysis of omics data.
metagenomics scrna-seq microbiome differential-expression differential-analysis multi-omics differential-abundance-analysis
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Feb 26, 2022 - HTML
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