A collection of C++ source code modules for forward and inverse simulations of Unified Tomographic Reconstruction.
A collection of C++ source code modules for modelling of forward and inverse problems in TEM of sparse atomic structures. See examples of usage at http://arxiv.org/abs/1911.11599 and http://arxiv.org/abs/1911.11598 .
SynapticVes-Py. Python code to support 3D quantitative analysis of presynaptic active zones in hippocampal mossy fiber boutons using electron tomograms and IMOD model output.
Landing page for information about transsynaptic assembly research done by Andy A. Cole
Automated detection of protein complexes in cryo-electron tomography (cryoET) data. ML models identify five particle classes using a weighted F-β (β=4) metric focused on recall, especially for hard targets, helping reveal cellular “dark matter” and advance biological discovery.
Supplemental Scripts to accompany the manuscript titled 'Autonomous Electron Tomography Reconstruction with Machine Learning'
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