genomic alignment similarity search tool
Collection of simple C scripts for parsing vcf or bam files using the htslib C library. These scripts can be used as the starting point for more complex scripts
Finding Maximal Exact Matches (MEMs) using a Sampled LCP Array
GQuery is a software tool for rapidly querying large numbers of bgzip compressed, tabix indexed genomic data files e.g. vcf, maf, bed, bedGraph, etc. from multiple species with different genome builds without the need to develop, debug, and maintain custom file parsers. Search for particular germline or somatic mutations, copy number changes, di…
KS-Evol : Non-parametric hypothesis testing for time-series genomic variants using Monte Carlo based Komogrov-Smirnov test
Programs for sequence and structure alignments
Add a description, image, and links to the genomic-data-analysis topic page so that developers can more easily learn about it.
To associate your repository with the genomic-data-analysis topic, visit your repo's landing page and select "manage topics."