Python toolbox for creating and validating single-cell neuronal models with active dendrites.
Large language models for predicting ion channels modulating proteins
gHH: Generalised Hodgkin–Huxley Model
The Website of the Ramiréz Lab
#Ioneuroscience-modeling=)Repository for code and data related to ion channel modeling and analysis in neuroscience. Tools and scripts for simulating and analyzing ion channel dynamics. Software for processing electrophysiological data.
Rapid characterisation of hERG channel kinetics
Collection of experimental protocols in common patch clamp formats for rapid characterisation of ion channels
Model from Asadollahi et al. Hum. Mol. Genet. 2023
This is a simulation which emulates neurons behavior by representing local potentials in a neuron generated by interactions between neurotransmitters and ionic channels. The purpose is to connect them in order to simulate intelligent life but, for now, this is just one neuron.
🔬 Scripts for analyzing molecular dynamics trajectories of nanopores under the influence of an external electric field
🔬 OpenMM scripts for polarisable molecular dynamics with the AMOEBA force field
thesis defense presentation
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