Code for 3D reconstruction and anatomical annotation of lipid mass spectrometry imaging (MSI) data from zebrafish embryos (Nature Methods, 2025).

Set of python scripts to extend the capabilities of the LIPMIX software for analyzing small-angle scattering data from lipid systems (as part of the ATSAS package).

Upadtes to B.sc. project, creating a lipid heatmap for lipidomics data. Read further on bio on B.Sc. programs.

Statistical analysis portion of the LMQ software. Note that this software is incomplete.

epiLipidome Identifier and Optimized Nomenclature

Predicting infection severity in patients admitted to intensive-care unit

My B.Sc. project involves a collaboration with the M3 Lab Group at SDU. The purpose is to create a Shiny app that will be published. My code will be used in the app to visualize and analysis Metabolomics, Lipidomics data.

Single-nucleus transcriptomic profiling of gut and paired brain tissues from flies fed with lipid extracts.

Predicting lipid abundance in a murine brain section from spatial gene expression

Visualize relationship between pH, temperature, and the relative abundance of iGDGT lipids.

Data, scripts, and figures for "Homeocurvature adaptation of phospholipids to pressure in deep-sea invertebrates"

💻 Automatic lipid mapping topology writer

Quantify lipids using a feature table and internal standards table

The purpose of the study was to look at the causal relationships between lipid profiles (TG, HDL, and LDL) and diseases, drugs, and lifestyle choices. MR analysis was used and applied to GWAS from the UK Biobank to examine these associations using analysis software RStudio.

Bayesian nonparametric inference of ligand binding kinetics from molecular dynamics simulations.

Code for an analysis of the association of lipid regulating agents (e.g. statins) with incidence of dementia outcomes

LORA: Lipid Over-Representation Analysis

Biochemistry DIY board game

ADViSELipidomics is a novel Shiny app for the preprocessing, analysis, and visualization of lipidomics data.

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