Documentation website for standardized imaging biomarkers generated by the Canadian Consortium in Neurodegeneration in Aging

TIps for mri and mrs studies

This is my repo for displaying how a CNN model transforms an MRI image to predict whether there is a tumor in the image or not. Takes a little to load but it works :)

Demonstrating practical application of MIRACLE API.

Lecture and practical about Tractography, From Diffusion-weighted MRI to brain anatomical connectivity

An AI-powered brain MRI analysis system. Brain tumor segmentation is performed using the LGG MRI dataset with a U-Net architecture. The model identifies tumor regions in MRI images by generating masks, calculates the proportion of cancerous areas, and provides a risk assessment.

All things electrodes localisations in PD STN-DBS I'm working on in First Faculty of Medicine, Charles University, Prague

DIPY documentation generated html

A Jupyter Book that contains figures for the 3DREAM research paper (original code in Python3).

Demonstrating practical application of MIRACLE API.

Web site of spinalcordmri organization.

Homepage for ShinySurfer

A fast and valid tool for extracting diffusion-based brain connectivity

Medical Imaging - Deep Quality Assessment

Virtual Tour of the U of AZ research MRI scanning facility

Documentation for ExploreASL-GUI software

Code scripts of publishing and published articles

This is a repository hosting all code and models detailed in the article Computational limits to the legibility of the human brain.

prototype AFNI bids app implmenting participant level preprocessing with afni_proc.py