This RNAseq data analysis tutorial is created for educational purpose
An Automated RNASeq Analysis Pipeline (Differential expression to gene enrichment)
Pipeline for generating RNAseq-based cancer patient reports
EuroBioc2020 SPEAQeasy workshop https://eurobioc2020.bioconductor.org by Nick Eagles and Josh Stolz. For more information about SPEAQeasy check http://research.libd.org/SPEAQeasy/. For an example on how to use this RNA-seq processing pipeline and analyze the output files check http://research.libd.org/SPEAQeasy-example/.
RNA-Seq data analysis: whole transcriptome, stranded, dUTP method
Done as a summary of things that I learned in IBG summer internship. It contains a RNA-seq Nextflow pipeline for later data analysis and workflow management. It can go through quality control, trimming, indexing, alignment and statistical analysis.
RNA-seq replication analysis - Individual Project in the course of "Introduction to Bioinformatics" @ DSIT, NKUA.
RNA-seq analysis of tumour-associated CD8+ T cells in Mus musculus using DESeq2 and GSEA.
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