This is a Python pipe line for creating microbial pangenomes using Genome accession IDs or assembled genomes as inputs

Physics, chemistry, biology, earth science and math simulations

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Genome modeling and design across all domains of life

Guide through code for a Minimmap2 genome alignment and a seq-seq-pan pan-genome alignment with visualizations in R. The tutorial presents an example using two haplotypes of the optix locus in Heli…

Easy Amplicon data analysis pipeline

FCC China open source codebase and curriculum. Learn to code and help nonprofits.

Bioinformatics Tools

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A easy-to-use python package for mining natural diversity of any specific protein family from metagenomes

Generation of protein sequences and evolutionary alignments via discrete diffusion models

List of papers about Proteins Design using Deep Learning