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✒️ Text Annotation Ontology

Update documentation website

A repository to publish documentation for the Text Annotation Ontology at vemonet.github.io/tao, used by the pubannotation.org service.

The original ontology was published at http://pubannotation.org/ontology/tao.owl, but it has now disappeared. Good thing I cloned it here! Seems like I am the official repository now 👀

The ontology hosted on this repository has been slightly modified with Protégé 5.5.0 to add ontology metadata (license, label, description, preferred prefix and namespace). I contacted the original authors of the ontology by email to validate we could use the cc-by license for this ontology.

I wish I could send a PR to the original repository that was created at https://github.com/pubannotation/tao, but since the repository is empty GitHub prevents me from sending a PR.

♻️ The documentation website hosted at vemonet.github.io/tao is automatically updated by a GitHub Action at every change to the ontology file.

📖 Generate the docs locally

Make sure Java ~17 and python >=3.8 are installed. We recommend to enable a python virtual environment.

Create the virtual environment:

python -m venv .venv

Activate the virtual environment:

source .venv/bin/activate

Install the dependencies:

./scripts/install.sh

Build the docs:

./scripts/build.sh

Start a web server to check the generated docs locally:

./scripts/start.sh

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