Transform your voice into text instantly with the power of OpenAI, Groq, and Deepgram APIs. Say goodbye to macOS dictation limitations and hello to lightning-fast, accurate transcription! ⚡️

reticulate-free single cell format conversion

The NEST-Score (NEighbourhood Sample homogeneiTy-Score) evaluates how well the samples in an aggregated dataset mix in a cell's neighborhood in Principal Component space.

Collection of badges for indicating the state of a project

Type Less, Plot More. Create and auto-annotated and -saved (base) plots with very little code, and write (markdown) reports easily from your R scripts.

Granular Functional Filtering (Gruffi) to isolate stressed cells

Seurat meets tidyverse. The best of both worlds.

Color blindness friendly visualization of single-cell and bulk RNA-sequencing data

Implementation of the matrixStats API for sparse matrices

R package that extends ggplot2

Bayesian Hierarchical Modeling for Clustering Single Cell Genomic Data

📷 Read and Write 'Exif' Image/Media Tags with R

Clustering scRNAseq by genotypes

An R package to assist people answering R questions on Stack Overflow

Multicore and utility functions for Seurat 2 & 3, using doMC / foreach packages.

A collection of custom R functions. Works with MarkdownReports, SeuratUtils but also as a standalone set of more than 200 productivity tools.

A simple CSV editor for the Mac

R package to quantify and remove cell free mRNAs from droplet based scRNA-seq data

This repository contains R code, with which you can create 3D UMAP and tSNE plots of Seurat analyzed scRNAseq data

Single-cell RNA-seq Gene Expression Recovery

R toolkit for single cell genomics

A contextual menu plugin & service for macOS that allows users to make symbolic links in the Finder

🐟 🍣 🍱 Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using selective alignment

R implementation of MULTI-seq sample classification workflow

main repo: https://github.com/ucscGenomeBrowser/cellBrowser/ - Python pipeline and Javascript scatter plot library for single-cell datasets, http://cellbrowser.rtfd.org

R package for detecting doublets in single-cell RNA sequencing data

📖 A collection of pure bash alternatives to external processes.

Haplotype, isoform and gene level expression analysis using multi-mapping RNA-seq reads