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PhysiCell Public
Forked from MathCancer/PhysiCellPhysiCell: Scientist end users should use latest release! Bugfixes should be submitted to the development branch.
Jupyter Notebook UpdatedDec 20, 2025 -
MaBoSS Public
Forked from maboss-bkmc/MaBoSSC++ BSD 3-Clause "New" or "Revised" License UpdatedDec 19, 2025 -
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colomoto-docker Public
Forked from colomoto/colomoto-dockerThe CoLoMoTo Interactive Notebook: Accessible and Reproducible Computational Analyses for Qualitative Biological Networks
Jupyter Notebook UpdatedNov 28, 2025 -
libsbml-plus-packages Public
Conda recipe for libsbml with all packages
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libsbml-feedstock Public
Forked from conda-forge/libsbml-feedstockA conda-smithy repository for libsbml.
Shell BSD 3-Clause "New" or "Revised" License UpdatedNov 18, 2025 -
PhysiCell-Studio Public
Forked from PhysiCell-Tools/PhysiCell-StudioGUI application to build a PhysiCell model
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libsbml Public
Forked from sbmlteam/libsbmlLibSBML is a native library for reading, writing and manipulating files and data streams containing the Systems Biology Markup Language (SBML). It offers language bindings for C, C++, C#, Java, Jav…
C++ Other UpdatedNov 7, 2025 -
pyMaBoSS Public
Forked from colomoto/pyMaBoSSpython interface for the MaBoSS software
Jupyter Notebook UpdatedSep 23, 2025 -
roadrunner Public
Forked from sys-bio/roadrunnerlibRoadRunner: A high-performance SBML simulator
C++ Other UpdatedSep 12, 2025 -
intracellular_libs Public
Forked from PhysiCell-Tools/intracellular_libsRepo to host platform-specific libraries for intracellular solvers
Python UpdatedAug 6, 2025 -
template-model Public
Forked from PhysiBoSS-Models/template-modelA place for submitting new PhysiBoSS models
C++ UpdatedJul 11, 2025 -
colomoto-tutorial-sizek Public
Forked from colomoto/colomoto-tutorial-sizekJupyter Notebook UpdatedMay 3, 2025 -
conda-forge-pinning-feedstock Public
Forked from conda-forge/conda-forge-pinning-feedstockA conda-smithy repository for conda-forge-pinning.
Python BSD 3-Clause "New" or "Revised" License UpdatedApr 22, 2025 -
bioconda-recipes Public
Forked from bioconda/bioconda-recipesConda recipes for the bioconda channel.
Shell MIT License UpdatedApr 12, 2025 -
staged-recipes Public
Forked from conda-forge/staged-recipesA place to submit conda recipes before they become fully fledged conda-forge feedstocks
Python BSD 3-Clause "New" or "Revised" License UpdatedApr 9, 2025 -
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PhysiCOOL Public
Forked from marcorusc/PhysiCOOLA generalized, model-agnostic framework for model calibration in PhysiCell.
Python BSD 3-Clause "New" or "Revised" License UpdatedMar 2, 2024 -
COVID19 Public
Forked from pc4covid19/COVID19Rapid prototyping coalition for SARS-CoV-2 tissue infection dynamics. (integrated model)
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PhysiMESS Public
Forked from CicelyKrystyna/PhysiMESSPhysiCell MicroEnvironment Structure Simulation
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python-scripts Public
Forked from PhysiCell-Tools/python-scriptsUseful Python scripts related to PhysiCell
Python UpdatedJul 21, 2022 -
WebMaBoSS Public
A web interface for MaBoSS modeling
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pb4covid19 Public
Forked from pc4covid19/pc4covid19PhysiBoSS for COVID19 simulator app for MyBinder/nanoHUB
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MaBoSS_Course Public
Material for MaBoSS course organized by PerMedCoE
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