Best Practices for Using eBird Data

JooYoung Seo's Academic CV Written in R Markdown

Lecture notes/book in progress on computing for conservation genomics

My CV built using R Markdown and the vitae package.

Auto-generation of Citation Graph of References in Python

Resources for Influenza Research

📜 My Data Driven CV written with R, YAML, & LaTeX

Integrating influenza antigenic dynamics with molecular evolution

R is nowadays probably the most powerful tool for calculations of all kinds. There are plenty of modules available for work with molecular data. Those will be introduced during the course.

This is a simple introductory tutorial to help you get started with using BEAST2 and its accomplices.

Course Website

Scientific research information service using R and tidyverse

Investigating the (co)evolution of reassorting influenza B lineages.

PhD thesis

Tidy spatial analyses workshop

A template for creating a PhD dissertation at American University with R Markdown based on the AU latex thesis template and the bookdown package

📖 A Starter Kit for Bookdown with Chapter Bibliographies

Tutorial for the coalescent with reassortment

Basics of tip-dating in BEAST2

Tutorial on how to set-up a Mascot analysis

workshop content for IDE 2023

CV template - PDF from rmarkdown

analyze substitution rate and mutation behavior within variants.

A Discrete-time Markov Process for Predicting Influenza Evolution.

Project: The influenc of HIV within host evolution on transmission tree reconstruction