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"Paste once, run once." — Trimmy flattens those multi-line shell snippets you copy so they actually paste and run.

extract SV signal from a BAM

don't get DUP'ed or DEL'ed by your putative SVs.

structural variant calling and genotyping with existing tools, but, smoothly.

Seamless integration between Django REST framework and Datatables.

Useful bash one-liners for bioinformatics.

GoAccess is a real-time web log analyzer and interactive viewer that runs in a terminal in *nix systems or through your browser.

A collection of (mostly) technical things every software developer should know about

fast, pure-python interval overlap testing

better(?) xargs in go

a pileup library that embraces the huge

sort genomic data

miscellaneous scripts for bioinformatics/genomics that dont merit their own repo.

cython + htslib == fast VCF and BCF processing

fast BAM/CRAM depth calculation for WGS, exome, or targeted sequencing

😎 Awesome lists about all kinds of interesting topics

🐚 Use your terminal shell to do awesome things.

An ultra-simplified explanation to design patterns

Interactive roadmaps, guides and other educational content to help developers grow in their careers.

The ultimate vim distribution

Mitochondrial genome of white spruce (Picea glauca)

🔧 .files, including ~/.macos — sensible hacker defaults for macOS

📚 Freely available programming books

Capture website screenshots

BWK awk modified for biological data

Python wrapper -- and more -- for Aaron Quinlan's BEDTools (bioinformatics tools)

fugitive.vim: A Git wrapper so awesome, it should be illegal