Baselines for generating radiology reports on the MIMIC-CXR chest x-ray dataset.
Use
$ ssh -L 8095:localhost:8095 night # for various values of 8095
$ cd /scratch/wboag/2019/cxr/cxr-baselines
$ . venv/bin/activate
$ ipython notebook --no-browser --port=8095
Overview
build_similarities_matrix.ipynb
- load the image embeddings, and create img_id -> [img_id] top-100 nearest neighbors
- /crimea/wboag/2019/cxr/camera_ready_top100.pkl