Mapping Alternative Splicing Events to pRoteins

List of Resources for Topological Data Analysis in Bioinformatics and Artificial Intelligence

A curated list of topological data analysis (TDA) resources and links.

📊 🌐 🧑‍🏫 Website for PhD-level independent readings course on Bayesian statistics with R and Stan, built with Quarto

A template to create CVs/Resumes with Quarto

Watercolor earth Quarto reveal.js theme

Applied modelling in drug development: flexible Bayesian regression modelling in Stan via brms

Estimate Parameters for Arbitrary R Functions using 'Stan'

Theme designed with readability and customizability in mind. Change it easily to your liking with the Style Settings plugin installed.

Python interface to amino acid properties and IEDB

🤖 A PyTorch library of curated Transformer models and their composable components

Fit interpretable models. Explain blackbox machine learning.

A curated list of Quarto talks, tools, examples & articles! Contributions welcome!

🧙 Build, run, and manage data pipelines for integrating and transforming data.

A Unified Semi-Supervised Learning Codebase (NeurIPS'22)

Create stacked violin plot

Port of Statistical Rethinking (2nd edition) code to Julia

A "Geom" for creating charts with a cyberpunk aesthetic

User friendly assertions for R

Batch balanced KNN

Detecting sites of genomic enrichment

cisTopic: Probabilistic modelling of cis-regulatory topics from single cell epigenomics data

An efficient and objective tool for optimizing microbiome rRNA gene trimming parameters

Tools for single-cell data processing

Progress bar in your R terminal

Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

R package for computation of (adjusted) rand-index and other such scores