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37 stars written in Jupyter Notebook
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The fastai deep learning library

Jupyter Notebook 27,574 7,657 Updated Oct 26, 2025

Convolutional Neural Networks on Graphs with Fast Localized Spectral Filtering

Jupyter Notebook 1,362 390 Updated Jun 13, 2020

Wining solution and its improvement for MICCAI 2017 Robotic Instrument Segmentation Sub-Challenge

Jupyter Notebook 637 212 Updated Mar 28, 2024

Graph Networks as a Universal Machine Learning Framework for Molecules and Crystals

Jupyter Notebook 544 159 Updated Apr 27, 2023

Cloud-based molecular simulations for everyone

Jupyter Notebook 456 126 Updated Oct 28, 2025

書籍「つくりながら学ぶ!深層強化学習」のサポートリポジトリです

Jupyter Notebook 352 159 Updated Jul 1, 2022

tensorflow implementation of Grad-CAM (CNN visualization)

Jupyter Notebook 313 104 Updated May 25, 2018

Python for chemoinformatics

Jupyter Notebook 230 91 Updated Jun 26, 2021

Scoring of shape and ESP similarity with RDKit

Jupyter Notebook 228 48 Updated Aug 19, 2025

active learning for accelerated high-throughput virtual screening

Jupyter Notebook 194 40 Updated Jun 15, 2024

[DEPRECATED] A Neural Network based generative model for captioning images using Tensorflow

Jupyter Notebook 147 56 Updated Dec 1, 2019

This repository contains code for the paper: Beyond Generative Models: Superfast Traversal, Optimization, Novelty, Exploration and Discovery (STONED) Algorithm for Molecules using SELFIES

Jupyter Notebook 131 39 Updated Aug 13, 2024

An Open-Source Molecular Builder and Free Energy Preparation Workflow

Jupyter Notebook 130 22 Updated Nov 5, 2025

Thompson Sampling

Jupyter Notebook 78 19 Updated May 7, 2025

a deep learning architecture for protein-ligand binding affinity prediction

Jupyter Notebook 76 19 Updated Jan 21, 2024

Open Source, Automated free binding free energy calculation between protein and small molecule. An all-in-one workflow, free energy pertubation with OpenMM.

Jupyter Notebook 59 11 Updated Apr 21, 2025
Jupyter Notebook 50 9 Updated Jul 16, 2025

Evaluating Protein Binding Interfaces with Transformer Networks

Jupyter Notebook 47 5 Updated Oct 24, 2023

Learning from Discharge Summaries to extract mentioned diagnoses using Hierarchical Attention Model

Jupyter Notebook 34 11 Updated Dec 17, 2017

Implementation of Google's Inception + ResNet v2 architecture in Keras

Jupyter Notebook 32 19 Updated Sep 10, 2016
Jupyter Notebook 26 13 Updated Mar 16, 2023

programs about machine learning

Jupyter Notebook 23 3 Updated Oct 10, 2017
Jupyter Notebook 20 4 Updated Mar 15, 2023
Jupyter Notebook 15 9 Updated Sep 19, 2022
Jupyter Notebook 13 1 Updated May 15, 2024

技術書のサポートページです

Jupyter Notebook 10 6 Updated Aug 21, 2020

Modified Pytorch Lightning implementation of paper:-https://jcheminf.biomedcentral.com/track/pdf/10.1186/s13321-019-0407-y

Jupyter Notebook 10 2 Updated Dec 22, 2020

testing and benchmarking perses protein mutations

Jupyter Notebook 6 Updated Sep 28, 2022

Integrated Cell project implemented in pytorch

Jupyter Notebook 4 Updated Apr 23, 2018
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