Lists (13)
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SegMamba: Long-range Sequential Modeling Mamba For 3D Medical Image Segmentation
A Python package for feature extraction of neural morphologies
DIPY is the paragon 3D/4D+ medical imaging library in Python. Contains generic methods for spatial normalization, signal processing, machine learning, statistical analysis and visualization of medi…
Read and write Neuroglancer datasets programmatically.
WebGL-based viewer for volumetric data
A PyTorch implementation for V-Net: Fully Convolutional Neural Networks for Volumetric Medical Image Segmentation
Skeletonize densely labeled 3D image segmentations with TEASAR. (Medial Axis Transform)
🐧 在 Linux 上提供一套完整的 Clash / Mihomo（Clash Meta） 代理与管理面板
verl: Volcano Engine Reinforcement Learning for LLMs
Automation engine to build, test and ship any codebase. Runs locally, in CI, or directly in the cloud
code for reading and processing Allen Institute for Brain Science data
NETracer: A Topology-Aware Iterative Tracing Approach for Tubular Structure Extraction
PyNeval, a toolbox for quantative analysis on neuron reconstruction result.
Efficient computation of the smallest bounding ball of a point set, in arbitrary number of dimensions
Deep-Learning Based Automated Neuron Reconstruction from 3D Microscopy Images Using Synthetic Training Images
A leaky integrate-and-fire computational model of the Drosophila brain
DeepBranchTracer: A Generally-Applicable Approach to Curvilinear Structure Reconstruction Using Multi-Feature Learning
CMake 教程 Modern-CMake 的简体中文翻译，中文版 Gitbook ：https://modern-cmake-cn.github.io/Modern-CMake-zh_CN/ Chinese(simplified) translation of famous cmake tutorial Modern CMake. GitHub Pages : https://modern…
Software package for neuron reconstruction and visualization
[Comms Bio 2023] Official Code for Fast Detection of Slender Bodies in High Density Microoscopy Data
a generalist algorithm for cellular segmentation with human-in-the-loop capabilities
Omnipose: a high-precision solution for morphology-independent cell segmentation
CenterNet3D An Anchor free Object Detector for Autonomous Driving
NMA Computational Neuroscience course
[Up-to-date] Awesome Agentic Deep Research Resources
[EMNLP2025] "LightRAG: Simple and Fast Retrieval-Augmented Generation"