Stars
Flexible and powerful data analysis / manipulation library for Python, providing labeled data structures similar to R data.frame objects, statistical functions, and much more
Python packaging and dependency management made easy
The fundamental package for scientific computing with Python.
Maple Mono: Open source monospace font with round corner, ligatures and Nerd-Font icons for IDE and terminal, fine-grained customization options. 带连字和控制台图标的圆角等宽字体，中英文宽度完美2:1，细粒度的自定义选项
A cross-platform command-line utility that creates projects from cookiecutters (project templates), e.g. Python package projects, C projects.
A reactive notebook for Python — run reproducible experiments, query with SQL, execute as a script, deploy as an app, and version with git. Stored as pure Python. All in a modern, AI-native editor.
Open source code for AlphaFold 2.
Matplotlib styles for scientific plotting
A system-level, binary package and environment manager running on all major operating systems and platforms.
Official git repository for Biopython (originally converted from CVS)
Library and command-line utility for rendering projects templates.
Operate and manipulate physical quantities in Python
Allows you to maintain all the necessary cruft for packaging and building projects separate from the code you intentionally write. Built on-top of, and fully compatible with, CookieCutter.
MDAnalysis is a Python library to analyze molecular dynamics simulations.
A system for assigning and grading notebooks
Generation of protein sequences and evolutionary alignments via discrete diffusion models
The Open Forcefield Toolkit provides implementations of the SMIRNOFF format, parameterization engine, and other tools. Documentation available at http://open-forcefield-toolkit.readthedocs.io
A Python API for the RCSB Protein Data Bank (PDB)
scikit-learn classes for molecular vectorization using RDKit
MSA(Multiple Sequence Alignment) visualization python package for sequence analysis
ASAP is a package that can quickly analyze and visualize datasets of crystal or molecular structures.