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bwt: An ANSI C implementation of the Burrows-Wheeler transformation (BWT)

C 18 1 Updated Sep 20, 2019

A quality control analysis tool for high throughput sequencing data

Java 561 105 Updated Dec 15, 2025

ADAM is a genomics analysis platform with specialized file formats built using Apache Avro, Apache Spark, and Apache Parquet. Apache 2 licensed.

Scala 1,041 315 Updated Jul 12, 2025

The Ensembl Variant Effect Predictor predicts the functional effects of genomic variants

Perl 515 171 Updated Dec 9, 2025

A set of command line tools (in Java) for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF.

Java 1,038 382 Updated Nov 13, 2025

Official code repository for GATK versions 4 and up

Java 1,896 622 Updated Dec 24, 2025

The Meta Spatial SDK Samples is a collection of code samples and projects that demonstrate the capabilities of the Meta Spatial SDK. Meta Spatial SDK enables mobile developers to build Meta Horizon…

Kotlin 242 57 Updated Dec 18, 2025

Ahead of time compiler for JVM bytecode targetting iOS, Mac OSX and Linux

Java 1,016 136 Updated Dec 2, 2025

A VR library for JMonkeyEngine

Java 15 2 Updated Dec 8, 2025

Raw nanopore signal mapper that enables real-time targeted sequencing

C++ 532 45 Updated Mar 5, 2024

Amazon Corretto 8 is a no-cost, multi-platform, production-ready distribution of OpenJDK 8

Java 2,130 230 Updated Dec 23, 2025

Apache NetBeans

Java 2,988 914 Updated Dec 23, 2025
13 2 Updated Jan 23, 2024

A terminal for iOS, with multiple windows

Perl 3,411 161 Updated Dec 21, 2025

Linux shell for iOS

C 18,980 1,210 Updated Dec 20, 2025

The LinuxBoot project is working to enable Linux to replace your firmware on all platforms.

C 946 111 Updated Dec 4, 2024

A fully open-source humanoid arm for physical AI research and deployment in contact-rich environments.

MDX 1,605 176 Updated Dec 24, 2025

A neural recording app for the Windows, OS X (Mac) and Linux.

C 35 26 Updated Dec 10, 2025

T2 SDE Linux

C 492 63 Updated Dec 24, 2025

Hardened allocator designed for modern systems. It has integration into Android's Bionic libc and can be used externally with musl and glibc as a dynamic library for use on other Linux-based platfo…

C 1,673 120 Updated Dec 18, 2025

AWS MCP Servers — helping you get the most out of AWS, wherever you use MCP.

Python 7,714 1,172 Updated Dec 24, 2025

A flexible package manager that supports multiple versions, configurations, platforms, and compilers.

Python 4,905 2,426 Updated Dec 23, 2025

Tebako: an executable packager (for Ruby programs)

Ruby 413 15 Updated Oct 20, 2025

Single-cell analysis in Python. Scales to >100M cells.

Python 2,302 687 Updated Dec 23, 2025

Official git repository for Biopython (originally converted from CVS)

Python 4,847 1,854 Updated Dec 15, 2025

Open source code for AlphaFold 2.

Python 14,125 2,528 Updated Oct 31, 2025

Democratizing Deep-Learning for Drug Discovery, Quantum Chemistry, Materials Science and Biology

Python 6,420 1,976 Updated Dec 22, 2025

A DSL for data-driven computational pipelines

Groovy 3,245 756 Updated Dec 20, 2025

The CosmicWatch Desktop Muon Detector supplementary material

Jupyter Notebook 299 87 Updated Sep 9, 2025

GNU Radio – the Free and Open Software Radio Ecosystem

C++ 5,834 2,054 Updated Nov 8, 2025
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