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Starred repositories

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Jupyter Notebook 2 1 Updated Jan 20, 2020

Specifications for OpenTelemetry

Makefile 4,136 941 Updated Dec 18, 2025

Multivariate Exploratory Data Analysis Toolbox for Matlab

MATLAB 33 23 Updated Nov 10, 2025
Python 3 2 Updated Jan 21, 2022

This workflow includes Quantitative Structure-Activity Relationship (QSAR) models to predict the hERG-related cardiotoxicity of chemicals.

9 3 Updated Jul 21, 2022

Speed virtual screening by 50X

Python 97 33 Updated Mar 24, 2023

Emap2sec is a computational tool to identify protein secondary structures

Jupyter Notebook 16 7 Updated Jul 31, 2024

An ultra-high-performance protein-protein docking for heterogeneous supercomputers

C++ 70 36 Updated Dec 10, 2023

Docking Tutorial Using Autodock Vina version 1.2.3 (2021) and AutoDock-GPU Version 1.5.3

Jupyter Notebook 29 9 Updated Aug 27, 2024

DockQ is a single continuous quality measure for Protein, Nucleic Acids and Small Molecule Docking Models

Python 348 71 Updated Nov 7, 2025

A Deep-learning based dOcking decoy eValuation mEthod

Python 57 12 Updated May 12, 2023

moldrug (AKA mouse) is a Python package for drug-oriented optimization on the chemical space ​

Python 39 7 Updated Nov 5, 2025

A deep learning framework for molecular docking

C++ 817 176 Updated Nov 3, 2025

Docker container for DOCK6 molecular docking software

Shell 3 3 Updated Dec 28, 2014

protein docking using a density-based descriptor for atoms charge and dynamics

Python 14 10 Updated Nov 17, 2022
JavaScript 37 9 Updated Oct 20, 2022

AutoDock Vina

C++ 873 274 Updated Dec 18, 2025

Comparison of spectra calculated using different multiplet programs

Jupyter Notebook 6 Updated Dec 1, 2023

Core-Level Spectroscopy Simulations in Python

Python 42 16 Updated Jan 16, 2025

Calculation of linear programmed retention indices for Gas Chromatography peak data.

MATLAB 1 Updated Oct 19, 2021

Demo of MCR function for GC-MS Data

Python 2 Updated Apr 7, 2022

2-Dimensional Nedler-Mead simplex Cluster Resolution algorithm. Returns a value between 0 and 1, where a value of 1 describes two clusters which are completely resolved. A metric of model quality t…

Python 3 1 Updated Apr 6, 2022

A Python toolkit to compute molecular features and predict activities and properties of small molecules

Jupyter Notebook 21 10 Updated Jan 28, 2022

QSAR models and putative agents identified against SARS-CoV-2

Jupyter Notebook 10 4 Updated Mar 29, 2022

The mwtab package is a Python library that facilitates reading and writing files in mwTab format used by the Metabolomics Workbench for archival of Mass Spectrometry (MS) and Nuclear Magnetic Reson…

Python 1 Updated May 12, 2022

A simple framework for ANOVA on various types of Julia statistical models

Julia 19 2 Updated Nov 26, 2025

LC-MS data processing tool for large-scale metabolomics experiments.

C++ 91 52 Updated Jul 11, 2022

A Bioconductor R package - Automated Evaluation of Precursor Ion Purity for Mass Spectrometry Based Fragmentation in Metabolomics

HTML 16 4 Updated May 10, 2024

Galaxy tools for Python package DIMSpy: data processing of Direct-Infusion Mass Spectrometry-based metabolomics and lipidomics data

1 Updated Aug 24, 2018
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