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BARTweb_frontend Public
Forked from marvinquiet/BARTweb_dockerDocker based, new version of BARTweb
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transcriptional_condensates Public
Forked from zhenjiawang157/transcriptional_condensates -
Single-cell-chromatin-profiling-of-the-primitive-gut-tube Public
Forked from hongpan-uva/Single-cell-chromatin-profiling-of-the-primitive-gut-tubecode for the bioinformatics analyses of "Single-cell chromatin profiling of the primitive gut tube reveals regulatory dynamics underlying lineage fate decisions"
R UpdatedDec 22, 2021 -
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bart3d Public
A computational method for inferring transcriptional regulators associated with genome-wide differential chromatin interactions.
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CTCF_T-ALL_code Public
All codes used to generate results and figure that are reported in CTCF project.
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recognicer Public
an algorithm for identifying multi-scale broad peaks from ChIP-seq data
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BARTweb_custom_code Public
All codes used to generate the results and figures in BARTweb manuscript
Shell UpdatedJun 22, 2020 -
bart_py2 Public
BART (Binding Analysis for Regulation of Transcription) is a bioinformatics tool for predicting functional transcription factors (TFs) that bind at genomic cis-regulatory regions to regulate gene e…
Python BSD 2-Clause "Simplified" License UpdatedMay 15, 2020 -
bart_py3 Public
BART (Binding Analysis for Regulation of Transcription) is a bioinformatics tool for predicting functional transcription factors (TFs) that bind at genomic cis-regulatory regions to regulate gene e…
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BARTweb_backend Public
Forked from marvinquiet/bart2Revised version using adaptive lasso model to predict functional transcription factors from a gene list or a ChIP-seq binding profile.
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