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Burrow-Wheeler Aligner for short-read alignment (see minimap2 for long-read alignment)

Automated analysis and result reporting for targeted sequencing data

One stop MIP design and analysis

cBioPortal for Cancer Genomics

Lollipop-diagram to visualize genomic mutations

Backend server for Genome Nexus

Convert PDF to HTML without losing text or format.

Declarative visualization library for Python

matplotlib: plotting with Python

d3 library to build Circos graphs

BioCircos.js - interactive circos for biological data

Htmlwidgets binding R commands to the BioCircos.js library