Leviathan: A fast, memory-efficient, and scalable taxonomic and pathway profiler for (pan)genome-resolved metagenomics and metatranscriptomics

A "dot"-plot style viewer for .1aln files

Fast Tandem Repeat Finder

Pairwise whole genome aligner

Test data to be used for automated testing with the nf-core pipelines

A modular end-to-end suite for in silico recovery, clustering, and analysis of prokaryotic, microeukaryotic, and viral genomes from metagenomes. Implemented in NextFlow.

Architecture for creating bash pipelines, in particular, for bioinformatics

Tools for detecting alternative splicing events and genotype in single-cell gene expression data.

AutoML simultaneous bayesian hyperparameter optimization and feature selection

Various research projects

High-level analysis package for (bio-)informatics