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StemCell_Composition Public
Inferring stem cell composition using variant calling
R UpdatedOct 24, 2025 -
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OCT4scRNA-ATAC Public
multiomics OCT4
R BSD 3-Clause "New" or "Revised" License UpdatedMay 16, 2025 -
Ribofilio Public
Ribofilio is a python tool to estimate ribosomes drop off rate.
TeX BSD 3-Clause "New" or "Revised" License UpdatedMar 20, 2024 -
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Galactic and gravitational dynamics in Python
Python MIT License UpdatedApr 26, 2023 -
gatkVariantCalling Public
Snakemake pipeline for variant calling using GATK
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VQSR Public
GATK Variant Quality Score Recalibration for filtering variant calling set
Python BSD 3-Clause "New" or "Revised" License UpdatedMar 2, 2023 -
StructureVariations Public
Snakemake pipeline for detecting, annotating, filtering and visualising structure variations and gene fusions from WGS/WES.
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BulkRNASeq Public
Snakemake workflow for Bulk RNASeq at both genome level and transcripts level.
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Downsampling Public
Different strategies for Downsampling: Downsampling is not just throwing a read
Python BSD 3-Clause "New" or "Revised" License UpdatedMar 28, 2022 -
Kinship Public
Quick analysis for kinship, relatedness, IBS, IBD
Python BSD 3-Clause "New" or "Revised" License UpdatedMar 28, 2022 -
AssociationAnalysis Public
Rare variants association analysis tests is not only burden test. There are lots of test we can use.
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miRNA Public
Snakemake pipeline to detect miRNA
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