Repositories list

• trame-slicer

  Public
  Bring the capabilities of 3D Slicer to the web with modern UI using the trame framework!

  medical-imaging3d-slicervue3+ 7

  medical-imaging3d-slicervue33d-slicer-fork3d-slicer-custom-application3d-slicer-softwaretrametrame-apptrame-maintenance-programtrame-widget

  Python

  •

  Other

  •2424 forks•6868 stars•1717 issues•44 pull requests•Updated Sep 24, 2026Sep 24, 2026

• ITKUltrasound

  Public
  ITK module with classes particularly useful for ultrasound.

  pythonc-plus-plusitk+ 10

  pythonc-plus-plusitkultrasoundarfiscan-conversionb-modeultrasound-tissue-characterizationstrain-imaginguspect+ 3

  C++

  •

  Apache License 2.0

  •2323 forks•5757 stars•1313 issues•55 pull requests•Updated Sep 23, 2026Sep 23, 2026

• SlicerLayerDisplayableManager

  Public
  A 3D Slicer extension introducing a new displayable manager architecture for layered rendering and interaction handling.

  3d-slicer-extension

  3d-slicer-extension

  C++

  •

  BSD 3-Clause "New" or "Revised" License

  •22 forks•44 stars•66 issues•00 pull requests•Updated Sep 17, 2026Sep 17, 2026

• GirderEEGAnnotator

  Public
  Python

  •

  Apache License 2.0

  •00 forks•11 star•66 issues•00 pull requests•Updated Sep 16, 2026Sep 16, 2026

• GirderBIDS

  Public
  Girder plugin to import a BIDS database

  Python

  •

  Apache License 2.0

  •33 forks•11 star•11 issue•00 pull requests•Updated Sep 11, 2026Sep 11, 2026

• SlicerCustomAppTemplate

  Public
  Template to be used as a starting point for creating a custom 3D Slicer application

  pythonc-plus-pluscross-platform+ 9

  pythonc-plus-pluscross-platformimage-processingregistrationsegmentationvtkitkmedical-image-computing3d-slicer+ 2

  C++

  •

  Apache License 2.0

  •3232 forks•7171 stars•1616 issues•11 pull request•Updated Sep 10, 2026Sep 10, 2026

• SlicerVirtualReality

  Public
  A Slicer extension that enables user to interact with a Slicer scene using virtual reality.

  cmakeopenvrvtk+ 3

  cmakeopenvrvtk3d-slicerkitware3d-slicer-extension

  C++

  •

  Apache License 2.0

  •6262 forks•137137 stars•2525 issues•44 pull requests•Updated Sep 10, 2026Sep 10, 2026

• kwneuro

  Public
  A Python package for building MRI analysis workflows around diffusion microstructure and structural MRI data

  Python

  •

  Apache License 2.0

  •44 forks•55 stars•11 issue•00 pull requests•Updated Sep 5, 2026Sep 5, 2026

• dicom-anonymizer

  Public
  Tool to anonymize DICOM files according to the DICOM standard

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •5858 forks•144144 stars•55 issues•00 pull requests•Updated Sep 4, 2026Sep 4, 2026

• trame-slicer-test-data

  Public
  This repository contains test data for trame-slicer unit tests

  11 fork•00 stars•00 issues•00 pull requests•Updated Sep 3, 2026Sep 3, 2026

• HASI

  Public
  High-throughput Applications for Skeletal Imaging

  Python

  •

  Apache License 2.0

  •88 forks•77 stars•88 issues•44 pull requests•Updated Aug 23, 2026Aug 23, 2026

• SlicerNNUnet

  Public
  3D Slicer nnUNet integration to streamline usage for nnUNet based AI extensions.

  machine-learningmedical-imaging3d-slicer-extension+ 1

  machine-learningmedical-imaging3d-slicer-extensionnnunet

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •1515 forks•7171 stars•1111 issues•11 pull request•Updated Jul 29, 2026Jul 29, 2026

• GirderEEGViewer

  Public
  trame based viewer to visualize and annotate EEG files stored on a Girder data management platform

  Python

  •

  Apache License 2.0

  •00 forks•11 star•00 issues•00 pull requests•Updated Jul 3, 2026Jul 3, 2026

• ITKPhaseSymmetry

  Public archive
  Multi-scale Steerable Phase-Symmetry Filters for ITK

  itkimagingphase-analysis+ 1

  itkimagingphase-analysisitk-module

  Apache License 2.0

  •1313 forks•22 stars•00 issues•00 pull requests•Updated May 27, 2026May 27, 2026

• ITKStrain

  Public archive
  ITK filters to estimate a strain tensor field from a displacement field or a spatial transformation.

  itkstrain-imagingstrain-tensor+ 1

  itkstrain-imagingstrain-tensoritk-module

  Apache License 2.0

  •1111 forks•1010 stars•00 issues•00 pull requests•Updated May 27, 2026May 27, 2026

• ITKRLEImage

  Public archive
  Run-length encoded memory compression scheme for an itk::Image

  run-length-encodingitkimaging+ 1

  run-length-encodingitkimagingitk-module

  Apache License 2.0

  •1010 forks•44 stars•00 issues•00 pull requests•Updated May 27, 2026May 27, 2026

• SlicerCore

  Public
  CMake

  •

  Apache License 2.0

  •44 forks•44 stars•66 issues•22 pull requests•Updated May 27, 2026May 27, 2026

• GirderMedViewer

  Public
  Medical visualization tool built with VTK and trame for exploring medical data directly from Girder instances via Girder Web Components.

  vtkgirdertrame+ 1

  vtkgirdertrametrame-app

  Python

  •

  Other

  •55 forks•55 stars•66 issues•11 pull request•Updated May 26, 2026May 26, 2026

• ITKContourInterpolation

  Public archive
  An implementation of morphological contour interpolation

  segmentationinterpolation-methodsitk-module

  segmentationinterpolation-methodsitk-module

  C++

  •

  Apache License 2.0

  •1515 forks•3434 stars•22 issues•00 pull requests•Updated May 19, 2026May 19, 2026

• ITKMultipleImageIterator

  Public archive
  ITK remote module from an IJ article at http://www.insight-journal.org/browse/publication/915

  itk-module

  itk-module

  Apache License 2.0

  •66 forks•11 star•00 issues•00 pull requests•Updated May 14, 2026May 14, 2026

• SlicerPythonTestRunner

  Public
  Python test runner extension for 3D Slicer based on PyTest and PyTest JSON Report

  3d-slicer-extension

  3d-slicer-extension

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •22 forks•33 stars•55 issues•00 pull requests•Updated Apr 21, 2026Apr 21, 2026

• vpaw

  Public
  A surgical planning software system targeted to pediatric patients with airway obstruction.

  3d-slicer-custom-application

  3d-slicer-custom-application

  Python

  •

  Other

  •55 forks•33 stars•1616 issues•00 pull requests•Updated Apr 2, 2026Apr 2, 2026

• slicer-extensions-webapp

  Public
  Source code of the site allowing to browse and download Slicer extensions. This site is published at extensions.slicer.org and maintained by @Kitware on behalf …

  3d-slicer

  3d-slicer

  Vue

  •

  Apache License 2.0

  •22 forks•22 stars•1313 issues•1414 pull requests•Updated Feb 9, 2026Feb 9, 2026

• SlicerTrame

  Public
  3D Slicer extension to launch trame-slicer server directly from 3D Slicer

  3d-slicer-extension

  3d-slicer-extension

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •11 fork•77 stars•22 issues•00 pull requests•Updated Dec 12, 2025Dec 12, 2025

• volview-gtc2025-demo

  Public
  This demonstration showcases the integration of NVIDIA’s Clara open-source models into Kitware’s VolView platform. VolView is an open-source, clinical-grade app…

  TypeScript

  •

  Apache License 2.0

  •44 forks•1212 stars•11 issue•00 pull requests•Updated Dec 3, 2025Dec 3, 2025

• volview-insight

  Public
  VolView Insight is a unified platform for imaging and clinical data, providing researchers with an extensible testbed for developing, testing, and deploying mul…

  Vue

  •

  Apache License 2.0

  •33 forks•22 stars•00 issues•00 pull requests•Updated Nov 14, 2025Nov 14, 2025

• Medical-SAM-Adapter

  Public
  Adapting Segment Anything Model for Medical Image Segmentation

  Python

  •

  GNU General Public License v3.0

  •127127 forks•00 stars•00 issues•00 pull requests•Updated Nov 3, 2025Nov 3, 2025

• SAM-Med2D

  Public
  Kitware fork of SAM-Med2D

  Jupyter Notebook

  •

  Apache License 2.0

  •112112 forks•00 stars•00 issues•00 pull requests•Updated Oct 30, 2025Oct 30, 2025

• SlicerSkeletalRepresentation

  Public
  Collection of Skeletal Model Extensions for 3D Slicer/SlicerSALT

  3d-slicer-extension

  3d-slicer-extension

  Python

  •

  Apache License 2.0

  •1111 forks•66 stars•22 issues•00 pull requests•Updated Oct 27, 2025Oct 27, 2025

• x-ray-genius

  Public archive
  A web-based application image generation tool that generates synthetic X-rays (DRRs) from CT scans, enabling research and AI development in orthopedics and beyo…

  Python

  •

  Apache License 2.0

  •33 forks•99 stars•00 issues•00 pull requests•Updated Oct 21, 2025Oct 21, 2025