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liana

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FAIR single-cell RNA-seq pipeline mapping nerve–tumour–immune ligand–receptor crosstalk in glioblastoma across 170 donors (CELLxGENE Census, two sequencing-depth arms). Compartment integrity enforced as build gates against a held-out annotation. Snakemake + scvi-tools + scanpy + LIANA + marimo.

  • Updated Sep 12, 2026
  • Python

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