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@BioJulia @nf-core @ksumngs

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Showing results

Deterministic Typst compilation with Nix

Nix 294 12 Updated Feb 7, 2026

A virtualised HPC cluster based on SLURM and Rocky Linux 9

Shell 75 5 Updated Nov 28, 2025

A list of microgrant programs for your good ideas

1,665 82 Updated Jan 16, 2026

A private messenger for Android.

Kotlin 28,332 6,666 Updated Feb 16, 2026

A privacy-first, open-source platform for knowledge management and collaboration. Download link: http://github.com/logseq/logseq/releases. roadmap: https://discuss.logseq.com/t/logseq-product-roadm…

Clojure 40,993 2,451 Updated Feb 17, 2026

The second version of the Kraken taxonomic sequence classification system

C++ 868 297 Updated Jan 30, 2026

A pipeline to simulate sequencing reads, such as Amplicon, Target Capture, Metagenome, and Whole genome data.

Nextflow 33 8 Updated Jun 3, 2025

Parallelised and automated construction of metagenomic classifier databases of different tools

Nextflow 20 10 Updated Feb 11, 2026

NGS viral assembly and population genetics

Python 9 7 Updated Mar 8, 2021

Manage KDE Plasma with Home Manager [maintainer=@HeitorAugustoLN]

Nix 1,078 104 Updated Feb 10, 2026

Sparse multidimensional arrays using a DOK format, with support for TensorOperations.jl

Julia 42 5 Updated Jan 15, 2026

Tidier data visualization in Julia, modeled after the ggplot2 R package.

Julia 255 11 Updated Feb 17, 2026

National Park Service map symbols optimized for the web.

CSS 127 32 Updated May 6, 2024

A conda-forge distribution.

Shell 9,325 475 Updated Feb 13, 2026

Debug your GitHub Actions via SSH by using tmate to get access to the runner system itself.

JavaScript 3,500 325 Updated Dec 18, 2025

Your best CLI generator in JuliaLang

Julia 292 23 Updated Dec 15, 2025

Friends don't let friends make certain types of data visualization - What are they and why are they bad.

R 6,991 284 Updated Sep 3, 2025

Julia library for stylized terminal output

Julia 488 41 Updated Jan 28, 2026

Julia plugin for the Lapce Editor (using LanguageServer.jl)

Rust 9 Updated Jan 11, 2023

Lightning-fast and Powerful Code Editor written in Rust

Rust 38,076 1,233 Updated Feb 17, 2026

A Julia package for estimating phylogenetic networks from genomic data

Julia 20 Updated Jun 3, 2024

Julia package for phylogenetics based off of NewickTree.jl and the R packages ape, phytools, and castor

Julia 5 Updated Mar 14, 2025

Julia parser for the Stockholm file format (.sto) used for multiple sequence alignments (Pfam, Rfam, etc)

Julia 8 Updated Jan 17, 2024

Run Code-server on Android

Kotlin 1,029 115 Updated Dec 13, 2025

A Julia package that implements a category of reaction (transportation) network-type dynamical systems.

Julia 18 3 Updated Aug 18, 2025

A julia package for the simulation of stirred tank reactor with surface, gasphase or user defined chemistry models

Julia 4 Updated Jun 30, 2025

Tools for genomic features in Julia.

Julia 35 12 Updated Oct 1, 2024

Parse and process FASTA and FASTQ formatted files of biological sequences.

Julia 66 20 Updated Oct 22, 2024

Sequence alignment tools

Julia 64 24 Updated Aug 7, 2024

Parse and process SAM and BAM formatted files

Julia 29 14 Updated Apr 26, 2025
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