DBI-INFRA

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1. napari-colocalization napari-colocalization Public

   Colocalisation analysis of multi-channel images

   Jupyter Notebook 4 1

2. Automated-muscle-fiber-analysis Automated-muscle-fiber-analysis Public

   Imaris plugin developed within the scope of the collaboration between Christian Høgsbjerg and Abigail Mackey

   MATLAB

3. PrimaryCiliaAnalyzer PrimaryCiliaAnalyzer Public

   A Matlab script to segment and quantify primary cilia from 3D confocal image stacks

   MATLAB

4. OCTA_blood_vessel_analysis OCTA_blood_vessel_analysis Public

   Automated analysis of blood vessel morphology using angiographic optical coherence tomography

   MATLAB

5. Microglia_morphology_analysis Microglia_morphology_analysis Public

   Automated analysis of the morphology of microglia cells in H-DAB images using QuPath and ImageJ

   Groovy

6. pSynDetectQuPath pSynDetectQuPath Public

   Groovy