PaCMAP: Large-scale Dimension Reduction Technique Preserving Both Global and Local Structure

Robust Integration of Single-Cell Cytometry Datasets

Utilities (sometimes faster) for flowCore

A tutorial for the analysis of high-dimensional flow cytometry data

R package for pre-processing of mass and flow cytometry data

Friends don't let friends make certain types of data visualization - What are they and why are they bad.

Derive Spectra from Full Spectrum Cytometry Controls

Flow Cytometry Standard (FCS) Processing, Analysis, and Visualization

Panel optimization and unmixing tool for multicolor and spectral cytometry

FlowCT: A semi-automated workflow for deconvolution of immunophenotypic data and objective reporting on large datasets

Jotting Flow Cytometry Data Exported from FlowJo

Embed Julia in R

Repo for tools and code for Flow Core things

PubMed publication searcher for core facilities

A landing page for the hackathon event taking place after Bioc North America 2026 in Seattle, Washington (USA).

A step-by-step tutorial on analysing flow cytometry data in R

OSCA tutorial at the ISMB 2023

Applied Python Programming for Life Scientists

Python introduction for life scientists

Python for Life Scientists at the University of Bonn

Manual gating experiment with Claude Code and the Samusik dataset

Official source code of FreeCAD, a free and opensource multiplatform 3D parametric modeler.

Open Source GUI App for Cytometry Acquisition and Analysis

🔐 Access the system credential store from R

Pipeline to analyze flow cytometry data

Multifaceted R Pipeline for Analysing Spectral Flow Cytometry Data

A quality control framework for R packages used in Clinical Trials