A native look and feel Obsidian theme crafted for the way you think.

Physicochemical properties, indices and descriptors for amino-acid sequences.

This repo contains the results data for Round 2 of EGFR Protein Design Competition.

Python tool for converting files and office documents to Markdown.

Toolbox for molecular animations in Blender, powered by Geometry Nodes.

Files and utilities for protein-emoji

A simplified implementation of DSSP algorithm for PyTorch and NumPy

Spacedrive is an open source cross-platform file explorer, powered by a virtual distributed filesystem written in Rust.

OpenSCAD tools for generating physical keys

Large-scale Self-supervised Pre-training Across Tasks, Languages, and Modalities

Foundation Architecture for (M)LLMs

This repository contains the codebase to reproduce the results presented in the paper "Assessing the Generalization Capabilities of TCR Binding Predictors via Peptide Distance Analysis" by Castorin…

A repository for pandoc templates. Geared for Obsidian.

This is an enhancing export plugin base on Pandoc for Obsidian (https://obsidian.md/ ). It's allow you to export to formats like Markdown、Markdown (Hugo https://gohugo.io/ )、Html、docx、Latex etc.

A search engine that "just works" for Obsidian. Supports OCR and PDF indexing.

Manipulate markdown tables without touching the source code in Obsidian.

Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2

Core Functionalities for TarGene

A Julia implementation of the Targeted Minimum Loss-based Estimation

Converts MOC note files to an obsidian canvas

Type multiple letters at the same time to trigger text insertion, template insertion, or command execution.

Add Grammarly spellchecking to Obsidian.md.

a Transformer-based neural network for generating highly optimized protein sequences called Regularized Latent Space Optimization (RELSO)

🧶 Modular VAE disentanglement framework for python built with PyTorch Lightning ▸ Including metrics and datasets ▸ With strongly supervised, weakly supervised and unsupervised methods ▸ Easily conf…

Poke-env: Python Interface for Pokemon Showdown Bots

Protein Sequence Design with Deep Learning and Tooling like Monte Carlo Sampling and Analysis