Source code for Gramps Genealogical program

Multipass orchestrates virtual Ubuntu instances

🍻 Default formulae for the missing package manager for macOS (or Linux)

inferring regulatory cellular dynamics

NextDNS CLI client (DoH Proxy)

A bioinformatics best-practice processing and quality control pipeline for Xenium and Artera data

Python library to parse, format, validate, normalize, and map sequence variants according to HGVS Nomenclature (https://hgvs-nomenclature.org/).

Tool suite for HGVS variant descriptions

cuML - RAPIDS Machine Learning Library

Package for managing conda environment-based kernels inside of Jupyter

Header-only C++/python library for fast approximate nearest neighbors

Interactive Widgets for the Jupyter Notebook

A library for efficient similarity search and clustering of dense vectors.

Accelerated, Python-only, single-cell integration benchmarking metrics

Open-source, self-hosted note-taking tool built for quick capture. Markdown-native, lightweight, and fully yours.

Get up and running with Kimi-K2.6, GLM-5.2, MiniMax, DeepSeek, gpt-oss, Qwen, Gemma and other models.

Ray is an AI compute engine. Ray consists of a core distributed runtime and a set of AI Libraries for accelerating ML workloads.

rapids-singlecell: GPU-accelerated framework for scRNA analysis

Annotated data.

An R package to test for batch effects in high-dimensional single-cell RNA sequencing data.

A conda-forge distribution.

🎼 Integrate multiple high-dimensional datasets with fuzzy k-means and locally linear adjustments.

A tool for creating and running Linux containers using lightweight virtual machines on a Mac. It is written in Swift, and optimized for Apple silicon.

Assembly and binning of metagenomes

RFMIX - Local Ancestry and Admixture Inference Version 2

Ancestry and haplotype aware simulation of genotypes and phenotypes for complex trait analysis

Powerful system-level package manager for Linux, macOS and Windows written in Rust – building on top of the Conda ecosystem.

Google Drive public file downloader when curl/wget fails.

Intuitive guide to multi-omics integration with toy examples: supervised latent components (DIABLO), unsupervised shared/partial/unique structure (DIVAS), VAEs/conditional VAEs, and key baselines (…

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