Commits

History for

Commits on Mar 26, 2018

osx CI
rchikhi
committed
957dc02
updated CI
rchikhi
committed
3274575

Commits on Mar 25, 2018

well, giving up having just 2 checksums, and just recording one checksum per gcc compiler in the CI infrastructure
rchikhi
committed
fe0a203
forgot a file
gatb-ci
committed
e6ae6ef
added gatb-ci test case for ERR, hopefully fixing a year-long CI problem
gatb-ci
committed
3a35eb2

Commits on Feb 16, 2018

high abundance test
rchikhi
committed
694d83c

Commits on Feb 1, 2018

minor
rchikhi
committed
efef7c7
finally fixed th ERR test bug that prevented CI badge, thanks for moral support from Sergey Nurk; also updated manual
rchikhi
committed
b88ea6d

Commits on Dec 11, 2017

updated gatbcore
rchikhi
committed
17333bd

Commits on Apr 9, 2017

updated test
rchikhi
committed
6dee967

Commits on Mar 4, 2017

minor
rchikhi
committed
054fbce

Commits on Mar 3, 2017

minor
rchikhi
committed
d0cceb8

Commits on Mar 2, 2017

debug test ERR
rchikhi
committed
d989d8f

Commits on Dec 7, 2016

updated test
rchikhi
committed
943f62e

Commits on Aug 17, 2016

spring cleanup of Minia's source code, now it contains only the parts needed to work with GraphUnitigs
rchikhi
committed
517d3a0

Commits on Aug 9, 2016

added contigs_to_fastg from MEGAHIT,
rchikhi
committed
61d616a

Commits on May 26, 2016

reverted to original debloom for k>128
rchikhi
committed
f274c8b

Commits on Apr 7, 2016

fix test again to work on both Linux and OSX / Jenkins
genscale-admin
committed
4d91895
fix test again to work on both Linux and OSX / Jenkins
genscale-admin
committed
ab1f44b
fix test to work on both Linux and OSX / Jenkins
genscale-admin
committed
7263db7
fix path locator of wget/curl binary
genscale-admin
committed
0d6d875
fix path locator of minia binary
genscale-admin
committed
18bd712

Commits on Apr 6, 2016

fix tests exec un both Linux and Mac
genscale-admin
committed
ba4ddd9
update test files
genscale-admin
committed
ff270e9
fix compiling instructions and tests
genscale-admin
committed
a5afb9a

Commits on Sep 14, 2015

implemented EC removal for minia
rchikhi
committed
37b1f9c

Commits on Sep 12, 2015

in the process of implementing EC removal. some code and test cleanup
rchikhi
committed
2862321

Commits on May 17, 2015

removed time consuming backtracking for heuristic path traversal in bulge removal
rchikhi
committed
2c99c6a

Commits on May 16, 2015

implemented bulge removal :) instead of bubble removal. to follow spades. needs more tests of course
rchikhi
committed
6e9de5d

Commits on May 15, 2015

switched to a heuristic, spades-like bubble popping strategy. improved number of bubbles popped, as well as mismatches
rchikhi
committed
9e97d73

Commits on May 14, 2015

implemented SPAdes inspired tip clipping; also increased isolated edges removal
rchikhi
committed
9498b08

Commits on May 12, 2015

Add test
edrezen
committed
f942b0f

Commits on May 9, 2015

debug test
rchikhi
committed
329c37a

Commits on May 8, 2015

minor
rchikhi
committed
e4f7dd5
added coverage per node, fixed bubble popping
rchikhi
committed
09eaa99