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Showing results

🏷 Visualize and optionally limit the size of your Pull Requests

Shell 382 71 Updated May 25, 2025
Python 10 11 Updated Nov 6, 2025

🤗 smolagents: a barebones library for agents that think in code.

Python 25,466 2,299 Updated Feb 15, 2026

This repository contains the Hugging Face Agents Course.

MDX 25,386 1,779 Updated Feb 10, 2026

A DSL for data-driven computational pipelines

Groovy 3,301 769 Updated Feb 17, 2026

Drawing centromere constriction at chromosome ideograms, plotted with karyoploteR package from R

HTML 2 Updated May 10, 2022

Run INSERT-seq as an nf-core pipeline

Nextflow 1 Updated Dec 20, 2021

Stochastic Testing and Input Manipulation for Unbiased Learning Systems

Nextflow 30 14 Updated Nov 20, 2025

A pipeline to run and systematically evaluate Multiple Sequence Alignment (MSA) methods.

Nextflow 40 13 Updated Nov 20, 2025

Functionality for working with pipeline and sample sheet schema files in Nextflow pipelines

Groovy 50 31 Updated Feb 5, 2026

Simple test framework for Nextflow pipelines

Java 177 37 Updated Feb 13, 2026

A Nextflow plugin to estimate the CO₂ footprint of pipeline runs.

HTML 24 11 Updated Feb 12, 2026

Params validation plugin for Nextflow pipelines

Groovy 48 18 Updated Aug 7, 2024

A pipeline for the analysis of CRISPR edited data. It allows the evaluation of the quality of gene editing experiments using targeted next generation sequencing (NGS) data (`targeted`) as well as t…

Nextflow 55 32 Updated Feb 13, 2026

Repository to host tool-specific module files for the Nextflow DSL2 community!

Nextflow 1 Updated Dec 16, 2025

Python package with helper tools for the nf-core community.

Python 1 Updated Jan 30, 2026

Python package with helper tools for the nf-core community.

Python 292 224 Updated Feb 17, 2026

Repository to host tool-specific module files for the Nextflow DSL2 community!

Nextflow 398 967 Updated Feb 17, 2026