Tools (written in C using htslib) for manipulating next-generation sequencing data

Burrow-Wheeler Aligner for short-read alignment (see minimap2 for long-read alignment)

C library for high-throughput sequencing data formats

LEGO MINDSTORMS EV3 source code

haplotypic duplication identification tool

A modem/TNC to generate the AFSK audio tones for sending APRS messages using a Raspberry Pi Pico/Pico2

A benchmark suite to study the performance characteristics of genomics applications

Pipeline for genome scaffolding by modelling distributions of HiC pairs

Filter and calibration programs for Illumina BAM files