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Commits on Apr 22, 2015

• add docs for mendel errors

  brentp

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• update docs for new output format of tools.

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• start of comphet docs

  brentp

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• update history

  brentp

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• document --gt-pl-max for filtering

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• docs

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Commits on Apr 9, 2015

• typo

  

  arq5x

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• verion 0.13.1

  

  arq5x

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Commits on Apr 8, 2015

• typos

  

  arq5x

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• add future

  

  arq5x

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• @brentp is humble.

  

  arq5x

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• staging v0.13.0

  

  arq5x

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• Merge branch 'dev' of github.com:arq5x/gemini

  

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• Merge branch 'master' of github.com:arq5x/gemini

  

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Commits on Apr 7, 2015

• Remove formatting mistake in 'querying'

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  ctb

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Commits on Apr 6, 2015

• add more tests and document changes to database schema

  brentp

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Commits on Apr 1, 2015

• Merge branch 'dev'

  

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Commits on Mar 31, 2015

• Merge branch 'dev' of https://github.com/arq5x/gemini into genotype-likelihoods

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• Avoid pulling in python libraries from a users local site library. Thanks to @bw2. #426

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Commits on Mar 30, 2015

• remove mention of our vcftidy.py

  brentp

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Commits on Mar 27, 2015

• Update index.rst

  arq5x

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Commits on Mar 24, 2015

• Add -classic instruction to normalize/annotate workflow in index.rst

  dgaston

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• Update index.rst

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Commits on Mar 23, 2015

• bump to 0.12.2

  

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Commits on Mar 20, 2015

• typo

  

  arq5x

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• docs tweak

  

  arq5x

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• move to 0.12.1 b/c of pypi issues.

  

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Commits on Mar 19, 2015

• typo

  

  arq5x

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• typo

  

  arq5x

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• Merge pull request #400 from brentp/annotate-vcf

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• docs for annotate with VCF

  brentp

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• typos

  

  arq5x

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• update release history for version 0.12.0

  

  arq5x

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• [doc] add warning of new vcf preprocessing workflow for multiple alleles.

  

  arq5x

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Commits on Mar 16, 2015

• mention GATK limitation

  brentp

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