Skip to content

Pull requests: nf-core/funcscan

Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Reviews
Assignee
Filter by who’s assigned
Assigned to nobody Loading
Sort

Pull requests list

Change the default ampir model
#164 by Darcy220606 was merged Dec 21, 2022 Loading…
1 of 9 tasks
Add relevant parameters for antismash
#163 by Darcy220606 was merged Jan 18, 2023 Loading…
2 of 9 tasks
PoC: filtering samples before screening based on contig length
#162 by jfy133 was merged Dec 14, 2022 Loading…
9 tasks
Important! Template update for nf-core/tools v2.7.1
#161 by nf-core-bot was merged Dec 12, 2022 Loading…
Add Bakta download
#160 by jfy133 was merged Dec 6, 2022 Loading…
7 of 9 tasks
Fix deepBGC redundent directory nesting
#159 by jfy133 was merged Dec 6, 2022 Loading…
9 tasks done
Clean up RGI output
#157 by jfy133 was merged Dec 1, 2022 Loading…
4 of 9 tasks
Cleanup fARGene output
#155 by jfy133 was merged Dec 1, 2022 Loading…
9 tasks done
CI test workflows update WIP Work in progress
#153 by louperelo was closed Nov 23, 2022 Loading…
9 tasks
Add ampcombi enhancement Improvement for existing functionality
#152 by Darcy220606 was merged Nov 23, 2022 Loading…
6 of 9 tasks
Add last updates from dev
#151 by Darcy220606 was merged Nov 2, 2022 Loading…
9 tasks
Add bakta
#150 by jfy133 was merged Nov 30, 2022 Loading…
9 tasks done
AMPLIFY regularly requires longer run times...
#149 by jfy133 was merged Oct 28, 2022 Loading…
9 tasks
Resource optimisation
#148 by jfy133 was merged Oct 27, 2022 Loading…
9 tasks
Adds Antismash exitcode 1 to ignore
#147 by jfy133 was merged Oct 26, 2022 Loading…
9 tasks
[skip-ci] update metromap comBGC name
#144 by jfy133 was merged Oct 19, 2022 Loading…
9 tasks
add fargene to harmonization in metromap
#143 by jfy133 was merged Oct 19, 2022 Loading…
9 tasks
Update modules.config: have antiSMASH keep long contig headers
#141 by jasmezz was merged Oct 11, 2022 Loading…
3 of 9 tasks
Add gbk format to prodigal and cleanup the prodigal result folder enhancement Improvement for existing functionality
#140 by Darcy220606 was merged Oct 12, 2022 Loading…
2 of 9 tasks
add deepbgc database info to usage.md
#139 by louperelo was merged Oct 11, 2022 Loading…
9 tasks
transform all citations into APA format
#138 by louperelo was merged Oct 7, 2022 Loading…
9 tasks
Update antismashlite to not fail if no results in sample
#137 by jfy133 was merged Oct 5, 2022 Loading…
9 tasks
Important! Template update for nf-core/tools v2.6
#135 by nf-core-bot was merged Oct 5, 2022 Loading…
Update ci.yml
#132 by jfy133 was merged Sep 29, 2022 Loading…
9 tasks
ProTip! Filter pull requests by the default branch with base:master.