Abyzov lab

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1. CNVnator CNVnator Public

   a tool for CNV discovery and genotyping from depth-of-coverage by mapped reads

   C++ 236 66

2. CNVpytor CNVpytor Public

   a python extension of CNVnator -- a tool for CNV analysis from depth-of-coverage by mapped reads

   Python 217 30

3. vcf2diploid vcf2diploid Public

   personal genome constructor

   Java 11 11

4. AGE AGE Public

   a tools that implements an algorithm for optimal alignment of sequences with structural variants (SVs)

   C++ 9 7

5. All2 All2 Public

   A tool for filtering variants from all2all comparison of multiple clones or single cells

   Python 5 2

6. Leucippus Leucippus Public

   A tool for confirmation of mosaic variants from targeted sequencing

   Java 3 1