ADS Plaque

This repository describes the anlaysis performed in the paper Mann et al. Heterogeneous lineage-specific arginine deiminase expression within dental microbiome species. Microbiology Spectrum (2024)

This repository assumes that you are running in a Unix environment (e.g., Mac OSX or Linux) and you have conda installed.

To get this repository:

• Install and set up anaconda or miniconda as described as the bioconda documentation, including setting up channels.
• Clone this repository to your machine

git clone https://github.com/aemann01/ads_plaque.git && cd ads_plaque

To activate the conda environment

conda env create environment.yml
conda activate 2022-ADS_plaque

To deactivate the environment

conda deactivate 2022-ADS_plaque