Stars
Adaptive Riemannian Optimization for Multi-Scale Diffeomorphic Registration
Load 3D meshes from neuroanatomy atlases into Blender via brainglobe API
🚀✨ Help beginners to contribute to open source projects
Collecting guidance, documents, examples, templates for open-source software project, such as on governance, roadmaps, contributing, license, code of conduct
A metadata model capturing Spatial Anchoring of Neuroscience Data Structures, including brain atlas definitions.
Shared general purpose tools for the BrainGlobe project
Covering how to build electrophysiology pipelines with SpikeInterface
On brain templates & atlases, and how to build them.
Mix-and-match computer vision tools for your animal behaviour analysis
Build unbiased anatomical templates from individual images
Workflows that utilise BrainGlobe tools to perform data analysis and visualisation.
(Meta-)package repository for BrainGlobe's Python tools for computational neuroanatomy.
A napari plugin for stitching large tiled 3D imaging datasets
Slides giving an overview of NIU's behavioural analysis projects.
A template to generate repositories used to teach SE best practices
Slides for NIU collaborative coding and software development good practices
Toy examples highlighting good data management practices
Home website of the Neuroinformatics Unit
Python tools to read SLURM job parameters.
Python package template for new research software projects
napari: a fast, interactive, multi-dimensional image viewer for python