Stars
A digital textbook for working with huge 3D imaging datasets
Adaptive Riemannian Optimization for Multi-Scale Diffeomorphic Registration
Load 3D meshes from neuroanatomy atlases into Blender via brainglobe API
🚀✨ Help beginners to contribute to open source projects
Collecting guidance, documents, examples, templates for open-source software project, such as on governance, roadmaps, contributing, license, code of conduct
A metadata model capturing Spatial Anchoring of Neuroscience Data Structures, including brain atlas definitions.
Shared general purpose tools for the BrainGlobe project
Materials for the BrainGlobe & napari course at the Sainsbury Wellcome Centre
Covering how to build electrophysiology pipelines with SpikeInterface
Wrapper around a dash-plotly app to render it via Open OnDemand
On brain templates & atlases, and how to build them.
Mix-and-match computer vision tools for your animal behaviour analysis
Build unbiased anatomical templates from individual images
Workflows that utilise BrainGlobe tools to perform data analysis and visualisation.
(Meta-)package repository for BrainGlobe's Python tools for computational neuroanatomy.
A napari plugin for stitching large tiled 3D imaging datasets
Slides giving an overview of NIU's behavioural analysis projects.
A template to generate repositories used to teach SE best practices
Slides for NIU collaborative coding and software development good practices
Toy examples highlighting good data management practices