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  • Fred Hutchinson Cancer Research Center
  • Seattle

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Achievement: Arctic Code Vault Contributor

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Achievement: Arctic Code Vault Contributor

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  1. ACDnet_RNAdot_100plex ACDnet_RNAdot_100plex Public

    An accurate segmentation of cells and RNA dot-like expression (RNAdot) is a significant challenge for the analysis of 100-plexed imaging data. We present ACDnet, an efficient and robust deep-learni…

    Jupyter Notebook

  2. identifying_neurite_by_RRS identifying_neurite_by_RRS Public

    RRS code for automated identification of neurite growth in microfluidic device.

    Jupyter Notebook 4 1

  3. identifying_cell_migration_by_vessel_segmentation identifying_cell_migration_by_vessel_segmentation Public

    This repository contains code for implementing vessel segmentation method initially described in the paper:

    Jupyter Notebook

  4. infectious-pulse infectious-pulse Public

    Many-strain SIR epidemiological model

    Jupyter Notebook 1

  5. stochastic-infectious-pulse stochastic-infectious-pulse Public

    Stochastic version for evolutionary insights

    Jupyter Notebook

  6. diffusion-computation diffusion-computation Public

    from analytic to stochastic

    Jupyter Notebook