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To evaluate whether an immunotherapeutic vaccine could elicit tissue-based memory T cells
Jupyter Notebook MIT License UpdatedMar 3, 2026 -
ACDnet_RNAdot_100plex Public
An accurate segmentation of cells and RNA dot-like expression (RNAdot) is a significant challenge for the analysis of 100-plexed imaging data. We present ACDnet, an efficient and robust deep-learni…
Jupyter Notebook Apache License 2.0 UpdatedMar 3, 2026 -
identifying_neurite_by_RRS Public
RRS code for automated identification of neurite growth in microfluidic device.
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This repository contains code for implementing vessel segmentation method initially described in the paper:
Jupyter Notebook MIT License UpdatedNov 6, 2020 -
diffusion-computation Public
from analytic to stochastic
Jupyter Notebook GNU General Public License v2.0 UpdatedMay 17, 2018 -
probability-insighter Public
Xsight into distribution through randomness
Jupyter Notebook GNU General Public License v2.0 UpdatedAug 7, 2017 -
cell-repertoire Public
A home-made circle-packing algorithm for visualizing the T cell clonal distributions, and home-brew code for fitting the clonal-size-distribution
GNU General Public License v3.0 UpdatedApr 5, 2016 -
stochastic-infectious-pulse Public
Stochastic version for evolutionary insights
Jupyter Notebook GNU General Public License v2.0 UpdatedJan 13, 2016 -
infectious-pulse Public
Many-strain SIR epidemiological model
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numerical-trajectory Public
computation for differential equation
Python GNU General Public License v2.0 UpdatedMay 31, 2015
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