molequla v5.0 — Janus

The Janus release. Named for the architecture family this colony
flagshipps: resonance-based AI systems built on the Arianna Method,
θ = ε + γ + αδ. Molequla is the most complete Janus instantiation —
organisms that grow, reproduce, and die autonomously.

The interval since v4.0 Quickening (2026-04-16):
- Phase A: GPU forward path (CGO + cuBLAS opt-in)
- Phase B: cross-organism Dario-style logit graze (cross_graze.go)
- Phase C: §9 re-architected run — all 4 organisms reach adult,
  5 action=divide firings across 3 adults; first machine-verified
  natural mitosis on GPU 2026-06-04, no corpus seeding
- Loss-keyed mitosis gate (confidently-wrong-adult finding)
- Notorch tape promoted to canonical trainer (Chuck optimizer)
- Mycelium restored (post-§9 orchestration layer)
- Paper draft → DOI-cleared via three Desktop critique passes and
  one Mythos audit (Claude Fable 5, 2026-06-11)

The paper docs/molequla_paper.md (844 lines) and its committed
Act II + §9 run archives are the artifact of this release.

by Claude Code (neo the architect, Arianna Method)
Audited by Claude Fable 5 / Mythos.

notorch-edition: contiguous MatrixParam + BLAS acceleration (#22)

C molequla:
- MatrixParam: double **row_data → double *data (contiguous row-major)
- mat_matvec: eliminated per-call packing, direct cblas_dgemv
- 3-6x speedup on matvec (benchmarked: 320x320 110us→34us, 1280x320 443us→68us)
- mat_grow_rows/cols, adam_step, checkpoint save/load updated
- Training verified: loss 6.43→3.43 (300 steps), identical to before

Go molequla:
- blasDgemv via CGO: Go Matvec calls cblas_dgemv for matrices >= 256 elements
- Accelerate framework linked on macOS
- Training verified: embryo→infant ontogenesis, loss 6.35→3.10

ariannamethod/:
- notorch.c + notorch.h added (canonical from ariannamethod/notorch)
- Makefile updated to compile both into libaml
- libaml exports both am_* and nt_* symbols

Co-authored-by: Arianna <ataeff@MacBookPro.lan>
Co-authored-by: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

index.html: Apple-style UI with logo and themed organism

Replaced bare 20-line wrapper with a proper landing page:
- Centered logo header with stats badges
- Dark theme with CSS variable system
- Overrides molequla.js default styles (rounded inputs, SF Pro fonts,
  accent-colored messages, glow focus states)
- Mobile responsive
- Scrollbar styling
- Zero changes to molequla.js — pure CSS override layer

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

fix: adult param count 2M → 10M (verified against code + math)

d=320, 6 layers, 4x MLP expansion, 8 heads = ~10M params, not 2M.
Fixed in 6 places. Updated Files section to include all implementations
(C, Rust, JS, Go+AML/C).

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

Update README.md