Tools and Data related to Enzymatic Methylation Sequencing

Rucio - Scientific Data Management

Rust starter project for building CLI and libraries, with great CI

Command line utility for working with next-generation sequencing files.

Rust bindings to minimap2 library

Automated Pipeline to Generate FTP Files and Manage Submission of Sequence Data to Public Repositories

Prepares a SARS-CoV-2 submission for GISAID, NCBI or ENA. Can read GISAID or NCBI files, or plain fasta+tsv/csv/xls. Finds files in input directory and merges everything into a single output direct…

Open source, local, and self-hosted Amazon Echo/Google Home competitive Voice Assistant alternative

📚 Tools and databases for analyzing HLA and VDJ genes.

📖 A collection of pure POSIX sh alternatives to external processes.

Tips for Nextflow and cheatsheet for channel operation

Tools for synching and streaming files from Windows to Linux

This application gives Mac users in enterprise environments control over the administration of their machines by elevating their access level to administrator privileges on macOS. Users can set a t…

Build smaller, faster, and more secure desktop and mobile applications with a web frontend.

Letting Cisco AnyConnect give back our choice in how to configure our systems

TUIs for the terminal, desktop, and web

A collection of handy Bash One-Liners and terminal tricks for data processing and Linux system maintenance.

Apache Superset is a Data Visualization and Data Exploration Platform

A data visualization and analytics component, especially well-suited for large and/or streaming datasets.

Grist is the evolution of spreadsheets.

Make a cascading timeline from markdown-like text. Supports simple American/European date styles, ISO8601, images, links, locations, and more.

Forms made easy for Rails! It's tied to a simple DSL, with no opinion on markup.

EARRINGS: An efficient and ingenious adapter removal design for large-scale NGS meta-analyses

The next version of bwa-mem

is an open-source LIMS (laboratory Information Management System) for Next Generation Sequencing sample management, statistics and reports, and bioinformatics analysis service management.

full taxonomer cython repository

🐏 A CLI tool for processing data with functional pipelines

A novel scaffolding algorithm based on contig classification and optimization

Tools of The Trade, from Hacker News.

A fast CSV command line toolkit written in Rust.