Tags: baklazan/tombo

Added pre-processing command to annotate raw FAST5s with basecalled s…

…equence from a FASTQ. Also fixed several minor bugs and updated documentation. Added a note to docs for RNA addressing nanoporetech#9. Corrected minor bug in SAM parsing, closes nanoporetech#10. Re-factored Tombo events access code, closes nanoporetech#11 and closes nanoporetech#14. Minor fix to wiggle output function, closes nanoporetech#13. Minor fix to extract genome sequence from reads function, closes nanoporetech#15. Bumped to version 1.1.1

Minor version upgrade to Tombo to version 1.1. This update includes m…

…ajor changes to the alternative base model estimation as well as a new default 5mC model trained with this new method. Also added full detailed documentation to the repo. This version addressed issues from nanoporetech#2, nanoporetech#4, nanoporetech#5, nanoporetech#7, nanoporetech#8 and nanoporetech#9.

First public version of tombo.