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Showing results
Python 8 Updated Jul 23, 2026

Colorblind-friendly, perceptually uniform palettes for chimerax

Python 14 3 Updated Sep 26, 2020

Atomic model based landscape analysis for cryo-EM

Jupyter Notebook 8 1 Updated Jun 1, 2026

learns to improve tilt-series alignment by making it worse

Python 35 8 Updated Aug 5, 2026

Generates synthetic datasets for Cryo-Electron Tomography

Python 39 15 Updated Jul 14, 2026
Python 40 7 Updated Jul 27, 2026

Two-Dimensional Template Matching implemented in Python

Python 16 12 Updated Aug 7, 2026

GPU-accelerated template matching for cryo-ET

Python 65 19 Updated Aug 5, 2026
Python 6 1 Updated Jan 9, 2025

A possible schema for cryoET geometry metadata

Python 12 2 Updated Aug 11, 2025

Python codes related to the analysis of co-translating ribosomes on outer mitochondrial membrane

Python 1 Updated Apr 13, 2026

Particle annotations for the large-scale cryo-ET dataset of Chlamydomonas reinhardtii

Python 14 7 Updated Dec 22, 2025

GUI for Surface Morphometrics Pipeline

Python 3 2 Updated Jul 9, 2026
Python 5 1 Updated Nov 18, 2024

Calculate the Fourier shell correlation in PyTorch

Python 4 1 Updated Apr 13, 2026
C# 82 24 Updated Aug 4, 2026

Paraview Plugin for extracting mid-surfaces from binary segmentation masks.

C++ 13 3 Updated Sep 30, 2024

a tool for using surfaces to explore volumetric data in napari

Python 22 6 Updated Jun 13, 2026

cryo-EM tomogram simulator

MATLAB 33 7 Updated Aug 3, 2026

A tool to support interactive machine learning for cryoET data

Python 12 5 Updated Aug 30, 2024

Smart Parallel Automated Cryo Electron tomography

Python 24 8 Updated Jun 28, 2026

A curated list of projects related to the reMarkable tablet

7,614 266 Updated Jul 28, 2026

A universal API for FIBSEM control

Python 32 16 Updated Jun 26, 2025

Holds data for nwslR

R 16 1 Updated Jun 3, 2024
R 38 2 Updated Apr 25, 2024
Python 18 1 Updated Oct 21, 2024

TS2CG: Conversion of triangulated surfaces to (coarse grain) membrane models for molecular simulation

HiveQL 31 7 Updated Apr 17, 2025

Controlling Boox e-ink monitors from Python

Python 2 Updated May 3, 2023

membrane segmentation in 3D for cryo-ET

Python 94 18 Updated Jul 20, 2026
Python 1 Updated Apr 9, 2023
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