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🌙 LunarVim is an IDE layer for Neovim. Completely free and community driven.

Lua 19,260 1,495 Updated Jun 5, 2025

🎨 Type-safe and powerful Python library to generate SVG files

Python 394 30 Updated Dec 28, 2025

FieldPrism curates field images by correcting image distortion, converting pixel distance to metric, and renaming files based on QR codes.

Python 6 Updated Jun 20, 2023

The next generation of lagrange

C++ 8 Updated Feb 24, 2026

Ruby FFI

Ruby 2,131 344 Updated Apr 12, 2026

matplotlib wrapper for Ruby

Ruby 97 9 Updated Mar 16, 2023

The entrance repository of Markdown presentation ecosystem

TypeScript 12,041 280 Updated May 1, 2026

Phylogenetics and bioinformatics in the Julia language

Julia 1 Updated Sep 26, 2016

Easily create beautiful conky graphs and draws

Lua 146 23 Updated Jul 15, 2023

A place to store various configs I use and share often

5 Updated Nov 25, 2018

Helper scripts for processing and visualization of phylogenetics datasets

Jupyter Notebook 31 13 Updated Feb 19, 2024

Gonum is a set of numeric libraries for the Go programming language. It contains libraries for matrices, statistics, optimization, and more

Go 8,402 581 Updated May 4, 2026

Lightweight, super fast C/C++ (& Python) library for sequence alignment using edit (Levenshtein) distance.

C++ 597 172 Updated May 13, 2025

PASTA (Practical Alignment using SATe and Transitivity)

Python 96 28 Updated Jun 5, 2025

Python scripts (and a few non-python) that have come in handy for various phylogenetics-related tasks

Python 6 6 Updated Oct 6, 2015

Yet Another Hidden Markov Model repository.

Python 250 32 Updated Dec 2, 2015

A program for multimodel inference on speciation and trait evolution

C++ 35 9 Updated Sep 4, 2017

Graph of Life Commander

Python 3 3 Updated Aug 7, 2015

Allow users to visually lay out Arbor workflows.

Python 4 Updated May 1, 2014

A bundle of Tangelo applications used by NSF Arbor (Phylogenetic Comparative Methods system)

JavaScript 9 1 Updated Sep 25, 2018

Application prototype to upload datasets into Arbor, create new projects, and organize source data.

Python 3 1 Updated Dec 1, 2015

ARBOR Revolutionary Workflows for the Tree of Life.

C++ 3 1 Updated May 12, 2014

phylogenetics tools for linux (and other mostly posix compliant) computers

C++ 126 16 Updated Apr 18, 2026

Source tree graph database

Java 16 6 Updated Oct 23, 2016

simulator of collections of trees that are based on a classification with stochastic errors introduced

C++ 2 1 Updated Jun 26, 2012

Phylogenetic penalized likelihood

C++ 57 22 Updated Jun 27, 2025

A versatile and scalable algorithm for rogue taxon identification. Also includes implementations of the maximum agreement subtree, leaf stability index and taxonomic instability index

C 23 7 Updated Aug 19, 2021

just a test of the d programming language and phylogenetics

1 Updated Sep 23, 2011
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