Home for "How To Scale Your Model", a short blog-style textbook about scaling LLMs on TPUs

[MedIA 2024] This is a code implemention of the joint learning framework proposed in the manuscipt "Joint learning framework of cross-modal synthesis and diagnosis for Alzheimer's disease by mining…

Vision Foundation Models for Medical AI, including RETFound, DINOv2, DINOv3

AirQuant is a framework based in MATLAB primarily for extracting airway measurements from fully segmented airways of a chest CT.

Helper functions to create COCO datasets

Create graph networks of N dimensional binary images for analysis with python using NetworkX and NumPy.

A framework for data augmentation for 2D and 3D image classification and segmentation

This is a tool to quickly preview nifti images on the terminal

MONAI Tutorials

Representation learning on large graphs using stochastic graph convolutions.

Graph CNNs for population graphs

PyTorch implementation of Deformable Convolution

Deformable Convolutional Networks

Medical Imaging Deep Learning library to train and deploy 3D segmentation models on Azure Machine Learning

InnerEye dataset creation tool for InnerEye-DeepLearning library. Transforms DICOM data into mask for training Deep Learning models.

Attributing predictions made by the Inception network using the Integrated Gradients method

Medical image registration using deep learning

A Python module for communicating with the Twilio API and generating TwiML.

Artery vein separation

The source code works for pulmonary vascular tree matching, including a data set with 10 synthetic trees for evaluation

Matlab wrapper to Veksler, Boykov, Zabih and Kolmogorov's implementation of Graph Cut algorithm. Use the following citation if you use this software. There is a simple example of image segmentation…

We are building an open database of COVID-19 cases with chest X-ray or CT images.

Subtype and Stage Inference [Young+, Nature Communications 2018]

Subtype and Stage Inference (SuStaIn) algorithm with an example using simulated data.

Medical imaging processing for AI applications.