📊 A universal enrichment tool for interpreting omics data

Harmonization of multi-site imaging data with ComBat

Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data

Medical image analysis framework merging ANTsR and deep learning

MNI152 Template

FSL-R Interface package

ggseg3d R package for visualising brain atlases through plotly

GNU R package for reading and writing neuroimaging file formats. Not limited to FreeSurfer anymore, despite its name.

Deep Learning for Automatic Differential Diagnosis of Primary Central Nervous System Lymphoma and Glioblastoma: Multi-parametric MRI based Convolutional Neural Network Model

Used to create perfusion maps of computed tomography perfusion

That’s what I do: I drink and I know things.

Code to Implement the Smooth Euler Characteristic Transform (SECT)

R package to implement template ICA

WhiteStripe Package

R script to quickly create a descriptive statistics table

Brainnetome Atlas for the ggsegverse ecosystem

Analysis of diffusion tensor image analysis along the perivascular space (DTI-ALPS) and mortality risk using UK Biobank data

radiomic feature elimination, clustering and model building

jamovi module to build statistical charts (histogram, boxplot, point, bar, line...) with many options along with Likert and multiple response barplots, Principal component analysis and (Multiple) C…

prior-based deformable brain registration to the kirby template

Intra-individual brain atrophy rates from longitudinal MRI

R package BayesBrainMap implementing Bayesian brain mapping for individual functional topography and connectivity

qMriMaps

Coupling analysis coding pipeline, for the study "Structure-function coupling using fixel-based analysis and functional magnetic resonance imaging in Alzheimer’s disease and Mild Cognitive Impairme…

Freely available R code used for the analysis in the paper "Quantity and Quality: Normative Open-access Neuroimaging Databases"