Render LaTeX from any CLI agent directly in Kitty-compatible terminals

The FluxGarage RoboEyes library draws smoothly animated robot eyes on OLED displays, using the Adafruit GFX library.

Resume builder for academics and engineers

The Systems Biology Ontology (SBO) is a set of controlled, relational vocabularies of terms commonly used in Systems Biology, and in particular in computational modeling.

Reads key-value pairs from a .env file and can set them as environment variables. It helps in developing applications following the 12-factor principles.

A multi-agent LLM system for drug-target interaction (DTI) prediction

A cytoscape.js plugin supporting the layout of SBGN diagrams

Supports papers on the development and evaluation of analyst and reviewer agents. Generate and evaluate mechanistic hypotheses derived from datasets.

SketchLay: User-Guided Force-Directed Graph Layout through Freehand Sketching

A Python package and command-line interface for extracting knowledge graphs from text, with a special focus on supporting agents working with scientific hypotheses and experiment design

Goxel: Free and Open Source 3D Voxel Editor

An open-source fighting game engine that supports MUGEN resources.

Space-themed 🚀 Soko-Ban 🎮 clone created in Python using Pyxel.

Repair malformed JSON from LLMs, APIs, logs, and user input in Python.

An unofficial api for downloading papers from SciHub via DOI, PMID, title

NewsMap JS - JS implementation of the defunct newsmap.jp

a cheat-sheet for mathematical notation in code form

OCR powered screen-capture tool to capture information instead of images

Chrome extension to expand a prefix snippet into an expanded form.

CSS with few but great styles for basic HTML5 tags

NeRF (Neural Radiance Fields) and NeRF in the Wild using pytorch-lightning

scPerturb: A resource and a python/R tool for single-cell perturbation data

A latent text-to-image diffusion model

Stable diffusion google colab kernel

TENET is a tool for reconstructing gene regulatory networks from pseudo-time ordered single-cell transcriptomic data.

Tutorial on inferring gene regulatory networks from single-cell data

R Markdown Format for reveal.js Presentations

webhook is a lightweight incoming webhook server to run shell commands

A computational method for comparing cellular profiles with the flexibility to place a higher weight on functional features of interest.